Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Segnochrobactraceae
Genus
Pseudoxanthobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Segnochrobactraceae |
| Genus | Pseudoxanthobacter |
| Species | Pseudoxanthobacter soli |
| Strain | DSM 19599 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
833391 bp
Thymine Count
827520 bp
Guanine Count
1751696 bp
Cytosine Count
1752625 bp
Genome Length
5165242 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | SAMN02745172_03879 | Not Available | Negative | 4541384 - 4542343 | 33852.7 |
| fumarylacetoacetate (faa) hydrolase family protein | SAMN02745172_03880 | Not Available | Negative | 4542340 - 4543488 | 40711.6 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN02745172_03881 | Not Available | Positive | 4543780 - 4545249 | 51555.9 |
| xylulokinase | SAMN02745172_03882 | Not Available | Positive | 4545253 - 4546788 | 53280.9 |
| phosphoglycolate phosphatase | SAMN02745172_03883 | Not Available | Positive | 4546781 - 4547530 | 26573.5 |
| transcriptional regulator, rpir family | SAMN02745172_03884 | Not Available | Positive | 4547527 - 4548384 | 30939.4 |
| ribose-5-phosphate isomerase | SAMN02745172_03885 | Not Available | Positive | 4548504 - 4549208 | 25408.8 |
| monosaccharide abc transporter substrate-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN02745172_03886 | Not Available | Positive | 4549421 - 4550518 | 39715.6 |
| monosaccharide abc transporter atp-binding protein, cut2 family (tc 3.a.1.2.-) | SAMN02745172_03887 | Not Available | Positive | 4550812 - 4552326 | 53648.8 |
| simple sugar transport system permease protein | SAMN02745172_03888 | Not Available | Positive | 4552439 - 4553440 | 34684.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
