Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Segnochrobactraceae
Genus
Pseudoxanthobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Segnochrobactraceae |
| Genus | Pseudoxanthobacter |
| Species | Pseudoxanthobacter soli |
| Strain | DSM 19599 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
833391 bp
Thymine Count
827520 bp
Guanine Count
1751696 bp
Cytosine Count
1752625 bp
Genome Length
5165242 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | SAMN02745172_02649 | Not Available | Negative | 3072578 - 3073513 | 34021.4 |
| d-threo-aldose 1-dehydrogenase | SAMN02745172_02650 | Not Available | Positive | 3073671 - 3074657 | 35195.1 |
| l-fuconolactonase | SAMN02745172_02651 | Not Available | Positive | 3074654 - 3075550 | 32378.5 |
| hypothetical protein | SAMN02745172_02652 | Not Available | Positive | 3075547 - 3076134 | 21555.4 |
| l-fucose mutarotase | SAMN02745172_02653 | Not Available | Positive | 3076157 - 3076585 | 15481.0 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN02745172_02654 | Not Available | Positive | 3076620 - 3077465 | 29713.7 |
| altronate hydrolase | SAMN02745172_02655 | Not Available | Positive | 3077458 - 3078999 | 54497.6 |
| crispr-associated protein, cas2 family | SAMN02745172_02656 | Not Available | Negative | 3080379 - 3080669 | 10781.0 |
| crispr associated protein cas1 | SAMN02745172_02657 | Not Available | Negative | 3080679 - 3081041 | 14077.0 |
| crispr-associated protein csd2 | SAMN02745172_02658 | Not Available | Negative | 3081196 - 3082149 | 35566.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
