Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Segnochrobactraceae
Genus
Pseudoxanthobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Segnochrobactraceae |
| Genus | Pseudoxanthobacter |
| Species | Pseudoxanthobacter soli |
| Strain | DSM 19599 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
833391 bp
Thymine Count
827520 bp
Guanine Count
1751696 bp
Cytosine Count
1752625 bp
Genome Length
5165242 bp
Protein-coding Genes
4275 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase | SAMN02745172_02129 | Not Available | Negative | 2483388 - 2485034 | 59105.7 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN02745172_02130 | Not Available | Negative | 2485268 - 2486323 | 37745.4 |
| transcriptional regulator, laci family | SAMN02745172_02131 | Not Available | Negative | 2487235 - 2488281 | 36555.3 |
| abc-type spermidine/putrescine transport system, permease component ii | SAMN02745172_02132 | Not Available | Negative | 2488296 - 2489147 | 30396.6 |
| abc-type spermidine/putrescine transport system, permease component i | SAMN02745172_02133 | Not Available | Negative | 2489144 - 2489995 | 30533.5 |
| abc-type uncharacterized transport system ynjbcd, substrate-binding protein | SAMN02745172_02134 | Not Available | Negative | 2490170 - 2491330 | 41877.8 |
| abc-type sugar transport system, atpase component | SAMN02745172_02135 | Not Available | Negative | 2491390 - 2492511 | 39097.3 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN02745172_02136 | Not Available | Positive | 2492842 - 2494095 | 43615.3 |
| hypothetical protein | SAMN02745172_02137 | Not Available | Negative | 2494168 - 2494596 | 15669.7 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN02745172_02138 | Not Available | Positive | 2494744 - 2495649 | 33001.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
