Algoriphagus zhangzhouensis strain DSM 25035

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus zhangzhouensis strain DSM 25035 is a Gram-negative, non-motile rod bacterium that exhibits aerobic metabolism. This strain is classified within the mesophilic temperature range, with an optimal growth temperature of 25°C. It is characterized by having a single replicon and does not form spores. The non-spore-forming nature of Algoriphagus zhangzhouensis suggests that it relies on its aerobic metabolic pathways for survival in its environment. The fact that it is non-motile may indicate a lifestyle that is more dependent on its surrounding environment rather than active movement towards nutrients or favorable conditions. The specific accession number FRXN00000000.1 provides a reference for genetic and genomic studies related to this strain, facilitating further research into its biological and ecological roles. Understanding the traits of Algoriphagus zhangzhouensis can provide insights into its potential applications in biotechnological processes and its role in microbial communities, particularly in environments where aerobic conditions prevail. Its mesophilic characteristics also suggest potential adaptability to a range of moderate temperature habitats, which could be critical for its ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus zhangzhouensis
Strainstrain DSM 25035

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus zhangzhouensis strain DSM 25035 genome assembly,

Gene Summary

Adenine Count

1461793 bp

Thymine Count

1449585 bp

Guanine Count

936520 bp

Cytosine Count

950806 bp

Genome Length

4802154 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gh3 auxin-responsive promoterSAMN04488108_0918Not AvailableNegative1089982 - 109153259165.3
hypothetical proteinSAMN04488108_0919Not AvailablePositive1091582 - 109225925774.2
uncharacterized membrane protein ygdd, tmem256/duf423 familySAMN04488108_0920Not AvailablePositive1092285 - 109265913198.2
d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4)SAMN04488108_0921Not AvailablePositive1092637 - 109394150253.0
muramoyltetrapeptide carboxypeptidaseSAMN04488108_0922Not AvailablePositive1094067 - 109510737615.4
lysophospholipase l1SAMN04488108_0923Not AvailablePositive1095104 - 109580225881.6
meta domain-containing proteinSAMN04488108_0924Not AvailablePositive1095819 - 109650225313.3
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN04488108_0925Not AvailablePositive1096630 - 109724122741.3
peptidase family m23SAMN04488108_0926Not AvailablePositive1097228 - 109910571034.6
peroxiredoxin q/bcpSAMN04488108_0927Not AvailablePositive1099131 - 109958016906.3

Displaying genes 931 – 940 of 4074 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.