Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus zhangzhouensis |
| Strain | strain DSM 25035 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1461793 bp
Thymine Count
1449585 bp
Guanine Count
936520 bp
Cytosine Count
950806 bp
Genome Length
4802154 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN04488108_0063 | Not Available | Positive | 81468 - 82628 | 42791.1 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488108_0064 | Not Available | Positive | 82757 - 83893 | 41791.5 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN04488108_0065 | Not Available | Positive | 83968 - 84504 | 20387.1 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04488108_0066 | Not Available | Positive | 84768 - 86678 | 71839.9 |
| hypothetical protein | SAMN04488108_0067 | Not Available | Positive | 86814 - 88394 | 58106.8 |
| dna polymerase-3 subunit epsilon | SAMN04488108_0068 | Not Available | Positive | 88474 - 89853 | 52217.7 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488108_0069 | Not Available | Negative | 89914 - 91107 | 44028.7 |
| atp-binding cassette, subfamily f, member 3 | SAMN04488108_0070 | Not Available | Positive | 91199 - 93124 | 73195.7 |
| protein of unknown function | SAMN04488108_0071 | Not Available | Positive | 93165 - 94439 | 49405.2 |
| crispr-associated endoribonuclease cas6 | SAMN04488108_0072 | Not Available | Negative | 94803 - 95693 | 34150.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
