Algoriphagus zhangzhouensis strain DSM 25035

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Cyclobacteriaceae

Genus

Algoriphagus

Description

Algoriphagus zhangzhouensis strain DSM 25035 is a Gram-negative, non-motile rod bacterium that exhibits aerobic metabolism. This strain is classified within the mesophilic temperature range, with an optimal growth temperature of 25°C. It is characterized by having a single replicon and does not form spores. The non-spore-forming nature of Algoriphagus zhangzhouensis suggests that it relies on its aerobic metabolic pathways for survival in its environment. The fact that it is non-motile may indicate a lifestyle that is more dependent on its surrounding environment rather than active movement towards nutrients or favorable conditions. The specific accession number FRXN00000000.1 provides a reference for genetic and genomic studies related to this strain, facilitating further research into its biological and ecological roles. Understanding the traits of Algoriphagus zhangzhouensis can provide insights into its potential applications in biotechnological processes and its role in microbial communities, particularly in environments where aerobic conditions prevail. Its mesophilic characteristics also suggest potential adaptability to a range of moderate temperature habitats, which could be critical for its ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyCyclobacteriaceae
GenusAlgoriphagus
SpeciesAlgoriphagus zhangzhouensis
Strainstrain DSM 25035

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Algoriphagus zhangzhouensis strain DSM 25035 genome assembly,

Gene Summary

Adenine Count

1461793 bp

Thymine Count

1449585 bp

Guanine Count

936520 bp

Cytosine Count

950806 bp

Genome Length

4802154 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04488108_0305Not AvailableNegative358766 - 35912813799.5
rna polymerase sigma-70 factor, ecf subfamilySAMN04488108_0306Not AvailableNegative359163 - 35970821235.4
nramp (natural resistance-associated macrophage protein) metal ion transportersSAMN04488108_0307Not AvailableNegative359762 - 36101244130.7
pimeloyl-acp methyl ester carboxylesteraseSAMN04488108_0308Not AvailablePositive361076 - 36208938423.7
dna recombination protein rmucSAMN04488108_0309Not AvailablePositive362079 - 36332346977.0
trk system potassium uptake protein trkaSAMN04488108_0310Not AvailablePositive363471 - 36481149888.4
trk system potassium uptake protein trkhSAMN04488108_0311Not AvailablePositive364815 - 36626353309.3
atp-dependent helicase lhr and lhr-like helicaseSAMN04488108_0312Not AvailableNegative366260 - 36871993324.2
hypothetical proteinSAMN04488108_0313Not AvailablePositive369035 - 36954418682.2
hypothetical proteinSAMN04488108_0314Not AvailableNegative369607 - 37020921318.5

Displaying genes 321 – 330 of 4074 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.