Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | SAMN05660350_00974 | Not Available | Negative | 998112 - 998441 | 11663.1 |
| hypothetical protein | SAMN05660350_00975 | Not Available | Positive | 999075 - 999257 | 5935.16 |
| transcriptional regulator, trar/dksa family | SAMN05660350_00976 | Not Available | Positive | 999334 - 999654 | 11302.5 |
| d-amino-acid dehydrogenase | SAMN05660350_00977 | Not Available | Positive | 999813 - 1001093 | 45495.6 |
| anti-anti-sigma factor | SAMN05660350_00978 | Not Available | Positive | 1001123 - 1001587 | 16602.2 |
| caax protease self-immunity | SAMN05660350_00979 | Not Available | Positive | 1001935 - 1002840 | 30864.3 |
| caax protease self-immunity | SAMN05660350_00980 | Not Available | Negative | 1002916 - 1003767 | 29748.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_00981 | Not Available | Negative | 1003764 - 1004708 | 32488.5 |
| luxr family transcriptional regulator, maltose regulon positive regulatory protein | SAMN05660350_00982 | Not Available | Negative | 1004799 - 1007099 | 79913.0 |
| hypothetical protein | SAMN05660350_00983 | Not Available | Positive | 1007392 - 1007646 | 8542.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

