Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muconolactone d-isomerase | SAMN05660350_00944 | Not Available | Positive | 961219 - 961506 | 10910.0 |
| 3-oxoadipate enol-lactonase | SAMN05660350_00945 | Not Available | Positive | 961586 - 962350 | 26722.7 |
| 3-oxoacid coa-transferase subunit a | SAMN05660350_00946 | Not Available | Positive | 962363 - 963184 | 28784.1 |
| aaa atpase domain-containing protein | SAMN05660350_00947 | Not Available | Negative | 963234 - 966041 | 99827.9 |
| benzoate/toluate 1,2-dioxygenase reductase subunit | SAMN05660350_00948 | Not Available | Negative | 966025 - 968823 | 99478.8 |
| benzoate/toluate 1,2-dioxygenase beta subunit | SAMN05660350_00949 | Not Available | Negative | 968890 - 969438 | 21471.2 |
| benzoate/toluate 1,2-dioxygenase alpha subunit | SAMN05660350_00950 | Not Available | Negative | 969443 - 970819 | 51277.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05660350_00951 | Not Available | Positive | 971085 - 972029 | 34069.4 |
| l-alanine-dl-glutamate epimerase | SAMN05660350_00952 | Not Available | Positive | 972026 - 973126 | 39278.0 |
| catechol 1,2-dioxygenase | SAMN05660350_00953 | Not Available | Positive | 973174 - 974028 | 30943.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

