Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase | SAMN05660350_00924 | Not Available | Positive | 938332 - 938565 | 8431.94 |
| intein c-terminal splicing region | SAMN05660350_00925 | Not Available | Negative | 938703 - 941231 | 90358.0 |
| hypothetical protein | SAMN05660350_00926 | Not Available | Positive | 941567 - 942127 | 19839.3 |
| exodeoxyribonuclease v alpha subunit | SAMN05660350_00927 | Not Available | Negative | 942109 - 944352 | 79931.8 |
| single-strand dna-binding protein | SAMN05660350_00928 | Not Available | Positive | 944523 - 945011 | 16993.8 |
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05660350_00929 | Not Available | Positive | 945292 - 946854 | 52829.9 |
| transcriptional regulator, tetr family | SAMN05660350_00930 | Not Available | Positive | 946851 - 947474 | 21976.3 |
| aconitase | SAMN05660350_00931 | Not Available | Negative | 947519 - 950236 | 96819.0 |
| dna-binding transcriptional regulator, gntr family | SAMN05660350_00932 | Not Available | Positive | 950323 - 950997 | 24685.2 |
| putative transmembrane protein (pgpgw) | SAMN05660350_00933 | Not Available | Negative | 951095 - 951577 | 16717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

