Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_00884 | Not Available | Negative | 900460 - 901533 | 36816.9 |
| dna polymerase-1 | SAMN05660350_00885 | Not Available | Negative | 901716 - 903377 | 59080.4 |
| hypothetical protein | SAMN05660350_00886 | Not Available | Negative | 903460 - 903885 | 15273.1 |
| hypothetical protein | SAMN05660350_00887 | Not Available | Negative | 903876 - 904082 | 7495.79 |
| polyketide cyclase / dehydrase and lipid transport | SAMN05660350_00888 | Not Available | Positive | 904292 - 904744 | 16108.0 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05660350_00889 | Not Available | Positive | 904956 - 905726 | 25788.6 |
| acyl-coa dehydrogenase | SAMN05660350_00890 | Not Available | Positive | 905746 - 906930 | 43144.0 |
| hypothetical protein | SAMN05660350_00891 | Not Available | Positive | 907184 - 908737 | 53525.4 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN05660350_00892 | Not Available | Negative | 908638 - 909528 | 31998.2 |
| mannitol 2-dehydrogenase | SAMN05660350_00893 | Not Available | Negative | 909636 - 911153 | 55364.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

