Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/beta-phosphoglucomutase family hydrolase | SAMN05660350_00864 | Not Available | Negative | 880592 - 881323 | 25306.8 |
| hypothetical protein | SAMN05660350_00865 | Not Available | Positive | 881504 - 882049 | 18873.8 |
| hypothetical protein | SAMN05660350_00866 | Not Available | Positive | 882226 - 883185 | 32997.1 |
| acetyltransferase (gnat) domain-containing protein | SAMN05660350_00867 | Not Available | Negative | 883188 - 883994 | 27497.8 |
| pantothenate kinase | SAMN05660350_00868 | Not Available | Positive | 884116 - 885078 | 34866.7 |
| glycine dehydrogenase (decarboxylating) alpha subunit /glycine dehydrogenase (decarboxylating) beta subunit | SAMN05660350_00869 | Not Available | Negative | 885569 - 888580 | 105383.0 |
| merr hth family regulatory protein | SAMN05660350_00870 | Not Available | Negative | 888771 - 889343 | 20251.0 |
| hypothetical protein | SAMN05660350_00871 | Not Available | Negative | 889747 - 890238 | 17672.0 |
| merr family regulatory protein | SAMN05660350_00872 | Not Available | Negative | 890361 - 891086 | 26348.4 |
| forkhead associated (fha) domain, binds pser, pthr, ptyr | SAMN05660350_00873 | Not Available | Negative | 891216 - 891728 | 17824.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

