Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidine kinase | SAMN05660350_00854 | Not Available | Negative | 871037 - 871759 | 26288.2 |
| mfs transporter, umf1 family | SAMN05660350_00855 | Not Available | Negative | 871756 - 873108 | 47656.1 |
| glycerophosphoryl diester phosphodiesterase | SAMN05660350_00856 | Not Available | Negative | 873203 - 873979 | 27767.6 |
| hypothetical protein | SAMN05660350_00857 | Not Available | Positive | 874124 - 874555 | 16111.1 |
| hypothetical protein | SAMN05660350_00858 | Not Available | Negative | 874574 - 874819 | 8277.03 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN05660350_00859 | Not Available | Negative | 875909 - 876283 | 13524.3 |
| prevent-host-death family protein | SAMN05660350_00860 | Not Available | Negative | 876280 - 876519 | 8537.18 |
| hypothetical protein | SAMN05660350_00861 | Not Available | Positive | 876713 - 877075 | 12479.7 |
| peptidase m50b-like | SAMN05660350_00862 | Not Available | Positive | 877336 - 878040 | 24170.1 |
| alpha,alpha-trehalose phosphorylase | SAMN05660350_00863 | Not Available | Negative | 878176 - 880539 | 87304.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

