Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-cysteine:1d-myo-inositol 2-amino-2-deoxy-alpha-d-glucopyranoside ligase | SAMN05660350_00814 | Not Available | Positive | 826132 - 827403 | 45626.1 |
| dgtpase | SAMN05660350_00815 | Not Available | Positive | 827403 - 828431 | 37713.9 |
| predicted atp-dependent carboligase, atp-grasp superfamily | SAMN05660350_00816 | Not Available | Negative | 828726 - 829586 | 31480.8 |
| methionine synthase (b12-dependent) | SAMN05660350_00817 | Not Available | Positive | 829761 - 833510 | 136798.0 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05660350_00818 | Not Available | Positive | 833712 - 834443 | 25220.2 |
| imidazolonepropionase | SAMN05660350_00819 | Not Available | Negative | 834440 - 835621 | 39440.1 |
| acetyltransferase (gnat) family protein | SAMN05660350_00820 | Not Available | Negative | 835662 - 835967 | 10514.4 |
| putative recb family exonuclease | SAMN05660350_00821 | Not Available | Negative | 836129 - 837151 | 37070.0 |
| trna (adenine-58-n(1)-) methyltransferase | SAMN05660350_00822 | Not Available | Positive | 837182 - 838123 | 33391.8 |
| proteasome-associated atpase | SAMN05660350_00823 | Not Available | Positive | 838305 - 840086 | 65644.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

