Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN05660350_00764 | Not Available | Negative | 767192 - 768046 | 30362.2 |
| regulatory protein, luxr family | SAMN05660350_00765 | Not Available | Negative | 768146 - 769825 | 60677.1 |
| hypothetical protein | SAMN05660350_00766 | Not Available | Negative | 769958 - 772027 | 73093.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_00767 | Not Available | Positive | 772169 - 772990 | 28732.4 |
| acetyltransferase (gnat) family protein | SAMN05660350_00768 | Not Available | Positive | 773087 - 774712 | 59192.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660350_00769 | Not Available | Negative | 774817 - 775680 | 30916.7 |
| hypothetical protein | SAMN05660350_00770 | Not Available | Positive | 775752 - 776096 | 11686.7 |
| hypothetical protein | SAMN05660350_00771 | Not Available | Positive | 776346 - 776618 | 9518.41 |
| carotenoid cleavage dioxygenase | SAMN05660350_00772 | Not Available | Positive | 776806 - 778191 | 50248.9 |
| thioredoxin reductase (nadph) | SAMN05660350_00773 | Not Available | Positive | 778305 - 779945 | 58551.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

