Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase (cytochrome c) | SAMN05660350_00724 | Not Available | Positive | 725565 - 727277 | 62415.6 |
| coenzyme pqq precursor peptide pqqa | SAMN05660350_00725 | Not Available | Positive | 727283 - 727405 | 4510.06 |
| pyrroloquinoline quinone biosynthesis protein b | SAMN05660350_00726 | Not Available | Positive | 727513 - 728409 | 32250.7 |
| pyrroloquinoline-quinone synthase | SAMN05660350_00727 | Not Available | Positive | 728418 - 729158 | 27527.5 |
| pyrroloquinoline quinone biosynthesis protein d | SAMN05660350_00728 | Not Available | Positive | 729127 - 729465 | 12296.6 |
| pyrroloquinoline quinone biosynthesis protein e | SAMN05660350_00729 | Not Available | Positive | 729431 - 730570 | 42022.5 |
| cation:h+ antiporter | SAMN05660350_00730 | Not Available | Positive | 730620 - 731717 | 38234.0 |
| protein of unknown function | SAMN05660350_00731 | Not Available | Positive | 731832 - 732239 | 14666.5 |
| atp:cob(i)alamin adenosyltransferase | SAMN05660350_00732 | Not Available | Negative | 732300 - 732713 | 13850.4 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN05660350_00733 | Not Available | Positive | 733026 - 734432 | 48962.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

