Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05660350_00714 | Not Available | Positive | 717473 - 718357 | 31138.2 |
| hypothetical protein | SAMN05660350_00715 | Not Available | Positive | 718354 - 718503 | 5230.17 |
| hypothetical protein | SAMN05660350_00716 | Not Available | Positive | 718571 - 718813 | 8097.88 |
| transcriptional regulator, iclr family | SAMN05660350_00717 | Not Available | Positive | 719312 - 720082 | 27624.1 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | SAMN05660350_00718 | Not Available | Positive | 720182 - 721042 | 31063.0 |
| alcohol dehydrogenase groes-like domain-containing protein | SAMN05660350_00719 | Not Available | Positive | 721054 - 721641 | 20181.3 |
| hypothetical protein | SAMN05660350_00720 | Not Available | Positive | 721641 - 722069 | 14578.4 |
| membrane dipeptidase | SAMN05660350_00721 | Not Available | Negative | 722162 - 723346 | 41726.5 |
| transcriptional regulator, lyttr family | SAMN05660350_00722 | Not Available | Negative | 723343 - 724785 | 51495.3 |
| pqq system protein | SAMN05660350_00723 | Not Available | Positive | 724868 - 725551 | 25612.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

