Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05660350_00653 | Not Available | Positive | 652081 - 652941 | 30263.0 |
| lysm domain-containing protein | SAMN05660350_00654 | Not Available | Positive | 653301 - 654164 | 28681.6 |
| hypothetical protein | SAMN05660350_00655 | Not Available | Negative | 654227 - 654379 | 5280.91 |
| major facilitator superfamily protein | SAMN05660350_00656 | Not Available | Negative | 654478 - 655896 | 46019.3 |
| homoserine o-acetyltransferase | SAMN05660350_00657 | Not Available | Negative | 656102 - 657139 | 38569.1 |
| dna-binding transcriptional regulator, marr family | SAMN05660350_00658 | Not Available | Negative | 657214 - 657642 | 15577.9 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN05660350_00659 | Not Available | Positive | 657778 - 658833 | 37539.8 |
| putative regulatory protein, fmdb family | SAMN05660350_00660 | Not Available | Positive | 658909 - 659238 | 11501.7 |
| amis/urei family transporter | SAMN05660350_00661 | Not Available | Positive | 659242 - 659883 | 21792.9 |
| formamidase | SAMN05660350_00662 | Not Available | Positive | 659896 - 661143 | 44994.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

