Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05660350_00543 | Not Available | Positive | 541597 - 541947 | 12439.0 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05660350_00544 | Not Available | Positive | 542050 - 543711 | 58809.9 |
| subtilase family protein | SAMN05660350_00545 | Not Available | Positive | 543826 - 545157 | 44583.3 |
| hypothetical protein | SAMN05660350_00546 | Not Available | Positive | 545154 - 545387 | 7990.64 |
| stas domain-containing protein | SAMN05660350_00547 | Not Available | Positive | 545425 - 545790 | 13075.7 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05660350_00548 | Not Available | Positive | 545866 - 546657 | 26660.8 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN05660350_00549 | Not Available | Negative | 546904 - 548871 | 69594.0 |
| shikimate dehydrogenase | SAMN05660350_00550 | Not Available | Negative | 548861 - 549739 | 30703.9 |
| major facilitator superfamily protein | SAMN05660350_00551 | Not Available | Positive | 549982 - 551370 | 49800.9 |
| transcriptional regulator, tetr family | SAMN05660350_00552 | Not Available | Positive | 551460 - 552149 | 25883.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

