Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase alpha subunit | SAMN05660350_00493 | Not Available | Positive | 485957 - 486517 | 20176.4 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05660350_00494 | Not Available | Positive | 486514 - 487839 | 44074.5 |
| 3-oxoadipate enol-lactonase | SAMN05660350_00495 | Not Available | Positive | 487836 - 488615 | 26645.6 |
| 4-carboxymuconolactone decarboxylase | SAMN05660350_00496 | Not Available | Positive | 488612 - 489013 | 14758.3 |
| glucose-6-phosphate isomerase | SAMN05660350_00497 | Not Available | Negative | 489082 - 490743 | 60830.4 |
| benzaldehyde dehydrogenase (nad+) | SAMN05660350_00498 | Not Available | Positive | 490854 - 492314 | 50649.0 |
| protein of unknown function | SAMN05660350_00499 | Not Available | Negative | 492405 - 493892 | 52427.3 |
| mfs transporter, cp family, cyanate transporter | SAMN05660350_00500 | Not Available | Negative | 494078 - 495322 | 41308.3 |
| drug/metabolite transporter, dme family | SAMN05660350_00501 | Not Available | Negative | 495404 - 496366 | 32026.9 |
| transcriptional regulator, tetr family | SAMN05660350_00502 | Not Available | Negative | 496363 - 497004 | 22752.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

