Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase family, nad-binding rossmann fold | SAMN05660350_04998 | Not Available | Positive | 5162922 - 5163214 | 10175.3 |
| hypothetical protein | SAMN05660350_04999 | Not Available | Positive | 5165196 - 5165534 | 11570.7 |
| conjugative transposon protein tcpc | SAMN05660350_05000 | Not Available | Positive | 5165531 - 5166509 | 33070.1 |
| hypothetical protein | SAMN05660350_05002 | Not Available | Negative | 5167047 - 5167484 | 16480.3 |
| transposase dde domain-containing protein | SAMN05660350_05005 | Not Available | Positive | 5170721 - 5171035 | 12261.8 |
| gaf domain-containing protein | SAMN05660350_05006 | Not Available | Negative | 5171086 - 5171838 | 26748.8 |
| transposase, mutator family | SAMN05660350_05007 | Not Available | Negative | 5172365 - 5173618 | 45950.7 |
| prevent-host-death family protein | SAMN05660350_05008 | Not Available | Positive | 5173829 - 5174116 | 10311.3 |
| mrna-degrading endonuclease rele, toxin component of the relbe toxin-antitoxin system | SAMN05660350_05009 | Not Available | Positive | 5174113 - 5174388 | 10239.4 |
| trwc relaxase | SAMN05660350_05010 | Not Available | Positive | 5174928 - 5177234 | 81044.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

