Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN05660350_04908 | Not Available | Negative | 5077575 - 5078417 | 30493.7 |
| helicase/secretion neighborhood cpae-like protein | SAMN05660350_04909 | Not Available | Positive | 5078545 - 5079642 | 36350.8 |
| pilus assembly protein cpaf | SAMN05660350_04910 | Not Available | Positive | 5079639 - 5080778 | 39233.3 |
| tight adherence protein b | SAMN05660350_04911 | Not Available | Positive | 5080775 - 5081566 | 26151.8 |
| type ii secretion system (t2ss), protein f | SAMN05660350_04912 | Not Available | Positive | 5081563 - 5082288 | 23811.5 |
| protein of unknown function | SAMN05660350_04913 | Not Available | Positive | 5082412 - 5082681 | 8924.51 |
| tade-like protein | SAMN05660350_04914 | Not Available | Positive | 5082681 - 5083064 | 12599.4 |
| helicase/secretion neighborhood tade-like protein | SAMN05660350_04915 | Not Available | Positive | 5083061 - 5083429 | 11332.7 |
| purine-cytosine permease | SAMN05660350_04916 | Not Available | Negative | 5083526 - 5085094 | 55496.0 |
| transcriptional regulator, xre family with cupin sensor | SAMN05660350_04917 | Not Available | Positive | 5085196 - 5085816 | 21372.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

