Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_04878 | Not Available | Negative | 5047846 - 5048775 | 33751.3 |
| putative holin-x, holin superfamily iii | SAMN05660350_04879 | Not Available | Negative | 5048802 - 5049308 | 18110.1 |
| acetyl-coa synthetase | SAMN05660350_04880 | Not Available | Negative | 5049550 - 5051499 | 71430.1 |
| fhuf 2fe-2s c-terminal domain-containing protein | SAMN05660350_04881 | Not Available | Positive | 5051668 - 5052411 | 25031.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN05660350_04882 | Not Available | Negative | 5052487 - 5053503 | 36140.1 |
| short-chain dehydrogenase | SAMN05660350_04883 | Not Available | Negative | 5053500 - 5054198 | 23529.2 |
| merr family transcriptional regulator, redox-sensitive transcriptional activator soxr | SAMN05660350_04884 | Not Available | Positive | 5054247 - 5054717 | 16718.2 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN05660350_04885 | Not Available | Positive | 5054787 - 5055590 | 28826.3 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN05660350_04886 | Not Available | Negative | 5055598 - 5055873 | 9805.59 |
| abc-2 type transport system permease protein | SAMN05660350_04887 | Not Available | Negative | 5055964 - 5056821 | 30522.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

