Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protease ftsh catalytic subunit | SAMN05660350_04868 | Not Available | Negative | 5037191 - 5039179 | 71093.0 |
| hypoxanthine phosphoribosyltransferase | SAMN05660350_04869 | Not Available | Negative | 5039526 - 5041145 | 57026.2 |
| putative hydrolase/uncharacterized protein, coenzyme f420 biosynthesis associated | SAMN05660350_04870 | Not Available | Negative | 5041151 - 5042218 | 38274.1 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05660350_04871 | Not Available | Negative | 5042369 - 5043787 | 46223.5 |
| inorganic pyrophosphatase | SAMN05660350_04872 | Not Available | Positive | 5043843 - 5044337 | 18581.8 |
| Trna-thr | Not Available | Not Available | Positive | 5044484 - 5044559 | Not Available |
| dna polymerase-3 subunit delta' | SAMN05660350_04874 | Not Available | Negative | 5044618 - 5045778 | 40439.4 |
| dtmp kinase | SAMN05660350_04875 | Not Available | Negative | 5045810 - 5046574 | 27270.5 |
| trans-aconitate 2-methyltransferase | SAMN05660350_04876 | Not Available | Positive | 5046593 - 5047224 | 22419.6 |
| trypsin-like peptidase domain-containing protein | SAMN05660350_04877 | Not Available | Positive | 5047225 - 5047786 | 19072.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

