Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferases group 1 | SAMN05660350_04718 | Not Available | Positive | 4889527 - 4890519 | 36213.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05660350_04719 | Not Available | Positive | 4890516 - 4891718 | 42605.9 |
| d-sedoheptulose 7-phosphate isomerase | SAMN05660350_04720 | Not Available | Positive | 4891715 - 4892380 | 22912.2 |
| rfae bifunctional protein, domain ii | SAMN05660350_04721 | Not Available | Positive | 4892377 - 4893780 | 46477.6 |
| adp-heptose:lps heptosyltransferase | SAMN05660350_04722 | Not Available | Positive | 4893813 - 4894742 | 31775.1 |
| von willebrand factor type a domain-containing protein | SAMN05660350_04723 | Not Available | Negative | 4894879 - 4896522 | 55489.5 |
| dtdp-glucose 4,6-dehydratase | SAMN05660350_04724 | Not Available | Negative | 4896614 - 4897591 | 35285.0 |
| protein of unknown function | SAMN05660350_04725 | Not Available | Negative | 4897782 - 4898015 | 9264.55 |
| prephenate dehydrogenase | SAMN05660350_04726 | Not Available | Negative | 4898052 - 4898975 | 30726.2 |
| acyl-coa thioesterase | SAMN05660350_04727 | Not Available | Negative | 4898972 - 4899412 | 15357.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

