Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | SAMN05660350_04708 | Not Available | Negative | 4880206 - 4880865 | 23016.0 |
| conserved protein containing a zn-ribbon-like motif, possibly rna-binding | SAMN05660350_04709 | Not Available | Negative | 4880958 - 4881491 | 19133.2 |
| predicted arabinose efflux permease, mfs family | SAMN05660350_04710 | Not Available | Positive | 4881640 - 4882845 | 39711.4 |
| Trna-ser | Not Available | Not Available | Positive | 4882989 - 4883077 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4883099 - 4883171 | Not Available |
| l-lactate dehydrogenase (cytochrome) | SAMN05660350_04713 | Not Available | Negative | 4883991 - 4885301 | 46364.7 |
| hypothetical protein | SAMN05660350_04714 | Not Available | Positive | 4885592 - 4886260 | 21361.1 |
| dna-binding transcriptional regulator, marr family | SAMN05660350_04715 | Not Available | Positive | 4886286 - 4886801 | 18249.8 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05660350_04716 | Not Available | Positive | 4886982 - 4888481 | 53172.8 |
| adp-heptose:lps heptosyltransferase | SAMN05660350_04717 | Not Available | Positive | 4888475 - 4889530 | 35725.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

