Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN05660350_04648 | Not Available | Negative | 4798136 - 4799182 | 36086.8 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN05660350_04649 | Not Available | Negative | 4799179 - 4800564 | 50085.1 |
| pyruvate dehydrogenase e1 component | SAMN05660350_04650 | Not Available | Positive | 4802101 - 4804797 | 99813.4 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN05660350_04651 | Not Available | Positive | 4804826 - 4806157 | 46626.4 |
| dihydrolipoamide dehydrogenase | SAMN05660350_04652 | Not Available | Positive | 4806195 - 4808249 | 71202.2 |
| malate dehydrogenase (oxaloacetate-decarboxylating) | SAMN05660350_04653 | Not Available | Negative | 4808315 - 4810033 | 61910.1 |
| hypothetical protein | SAMN05660350_04654 | Not Available | Positive | 4810308 - 4810604 | 10316.5 |
| h+/gluconate symporter | SAMN05660350_04655 | Not Available | Positive | 4811089 - 4812432 | 45993.9 |
| hypothetical protein | SAMN05660350_04656 | Not Available | Positive | 4812437 - 4812558 | 3603.2 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05660350_04657 | Not Available | Positive | 4812691 - 4814055 | 45658.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

