Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna m(7)g-527 methyltransferase | SAMN05660350_04638 | Not Available | Negative | 4787926 - 4788628 | 24080.2 |
| hypothetical protein | SAMN05660350_04639 | Not Available | Negative | 4788629 - 4788829 | 7601.31 |
| transposase dde domain-containing protein | SAMN05660350_04640 | Not Available | Negative | 4788925 - 4789839 | 33772.7 |
| sugar or nucleoside kinase, ribokinase family | SAMN05660350_04641 | Not Available | Negative | 4789947 - 4790822 | 28455.1 |
| pseudouridine-5'-phosphate glycosidase | SAMN05660350_04642 | Not Available | Negative | 4790819 - 4791739 | 31006.2 |
| protein of unknown function | SAMN05660350_04643 | Not Available | Positive | 4791846 - 4792073 | 8201.82 |
| membrane protein | SAMN05660350_04644 | Not Available | Negative | 4792245 - 4793321 | 38467.4 |
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN05660350_04645 | Not Available | Negative | 4793450 - 4795618 | 74064.0 |
| hypothetical protein | SAMN05660350_04646 | Not Available | Negative | 4795762 - 4795986 | 8107.69 |
| alanine or glycine:cation symporter, agcs family | SAMN05660350_04647 | Not Available | Negative | 4796352 - 4797848 | 51988.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

