Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tyrosine/serine phosphatase | SAMN05660350_04578 | Not Available | Negative | 4719219 - 4720076 | 30849.5 |
| amino acid/amide abc transporter substrate-binding protein, haat family (tc 3.a.1.4.-) | SAMN05660350_04579 | Not Available | Positive | 4720283 - 4721503 | 41163.7 |
| branched-chain amino acid transport system atp-binding protein | SAMN05660350_04580 | Not Available | Positive | 4721569 - 4722312 | 25508.9 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05660350_04581 | Not Available | Positive | 4722366 - 4723184 | 29062.7 |
| amino acid/amide abc transporter membrane protein 1, haat family (tc 3.a.1.4.-) | SAMN05660350_04582 | Not Available | Positive | 4723181 - 4724065 | 30244.8 |
| branched-chain amino acid transport system permease protein | SAMN05660350_04583 | Not Available | Positive | 4724076 - 4725227 | 39943.7 |
| chitinase | SAMN05660350_04584 | Not Available | Negative | 4725324 - 4726907 | 55321.4 |
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05660350_04585 | Not Available | Positive | 4727143 - 4730259 | 113329.0 |
| hypothetical protein | SAMN05660350_04586 | Not Available | Negative | 4730354 - 4731238 | 31904.9 |
| transcriptional regulator, cdar family | SAMN05660350_04587 | Not Available | Negative | 4731391 - 4733328 | 67539.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

