Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05660350_04558 | Not Available | Positive | 4702751 - 4704472 | 60097.5 |
| two component transcriptional regulator, luxr family | SAMN05660350_04559 | Not Available | Negative | 4704621 - 4705277 | 23286.0 |
| predicted naringenin-chalcone synthase | SAMN05660350_04560 | Not Available | Negative | 4705423 - 4706457 | 35941.2 |
| 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase | SAMN05660350_04561 | Not Available | Negative | 4706531 - 4707232 | 24925.3 |
| protein of unknown function | SAMN05660350_04562 | Not Available | Negative | 4707242 - 4707589 | 13056.2 |
| hypothetical protein | SAMN05660350_04563 | Not Available | Positive | 4707661 - 4708158 | 17787.2 |
| ribokinase | SAMN05660350_04564 | Not Available | Positive | 4708185 - 4709117 | 29866.8 |
| hypothetical protein | SAMN05660350_04565 | Not Available | Positive | 4709173 - 4709319 | 4704.05 |
| hypothetical protein | SAMN05660350_04566 | Not Available | Positive | 4709471 - 4709611 | 5161.95 |
| transcriptional regulator, tetr family | SAMN05660350_04567 | Not Available | Positive | 4709810 - 4710433 | 22141.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

