Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase, ggdef domain | SAMN05660350_04537 | Not Available | Negative | 4676997 - 4678109 | 38430.4 |
| tigr03083 family protein | SAMN05660350_04538 | Not Available | Positive | 4678232 - 4679143 | 30943.9 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05660350_04539 | Not Available | Negative | 4679205 - 4680425 | 42294.5 |
| phosphate abc transporter substrate-binding protein, phot family (tc 3.a.1.7.1) | SAMN05660350_04541 | Not Available | Positive | 4681054 - 4682151 | 36860.4 |
| Trna-met | Not Available | Not Available | Positive | 4682185 - 4682261 | Not Available |
| hypothetical protein | SAMN05660350_04543 | Not Available | Negative | 4682381 - 4684558 | 78877.8 |
| hypothetical protein | SAMN05660350_04544 | Not Available | Negative | 4685201 - 4685908 | 24981.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05660350_04545 | Not Available | Positive | 4686233 - 4686613 | 12918.2 |
| hypothetical protein | SAMN05660350_04546 | Not Available | Negative | 4686932 - 4687083 | 5451.63 |
| tigr04255 family protein | SAMN05660350_04547 | Not Available | Negative | 4687842 - 4688966 | 40879.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

