Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | SAMN05660350_04507 | Not Available | Positive | 4644304 - 4644978 | 24272.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN05660350_04508 | Not Available | Positive | 4644989 - 4645891 | 31286.3 |
| menaquinone-dependent protoporphyrinogen oxidase | SAMN05660350_04509 | Not Available | Positive | 4645888 - 4646454 | 19422.1 |
| pyridoxamine 5'-phosphate oxidase | SAMN05660350_04510 | Not Available | Positive | 4646474 - 4646899 | 15478.5 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05660350_04511 | Not Available | Positive | 4647004 - 4648728 | 61558.1 |
| two component transcriptional regulator, luxr family | SAMN05660350_04512 | Not Available | Negative | 4648747 - 4649418 | 23894.9 |
| xylulose-5-phosphate/fructose-6-phosphate phosphoketolase | SAMN05660350_04513 | Not Available | Positive | 4650803 - 4653226 | 88077.9 |
| nitroimidazol reductase nima, pyridoxamine 5'-phosphate oxidase superfamily | SAMN05660350_04514 | Not Available | Positive | 4653223 - 4653678 | 16595.7 |
| rio1 family protein | SAMN05660350_04515 | Not Available | Negative | 4653684 - 4655405 | 62296.0 |
| acyltransferase, ws/dgat/mgat | SAMN05660350_04516 | Not Available | Negative | 4655510 - 4656874 | 46993.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

