Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05660350_00416 | Not Available | Positive | 394132 - 394797 | 23608.5 |
| methyltransferase domain-containing protein | SAMN05660350_00417 | Not Available | Positive | 394794 - 395579 | 29079.3 |
| creatinine amidohydrolase | SAMN05660350_00418 | Not Available | Positive | 395576 - 396388 | 29241.7 |
| phytanoyl-coa dioxygenase (phyh) | SAMN05660350_00419 | Not Available | Positive | 396379 - 397149 | 28187.8 |
| hypothetical protein | SAMN05660350_00420 | Not Available | Positive | 397146 - 398339 | 42743.0 |
| trna threonylcarbamoyl adenosine modification protein, sua5/ycio/yrdc/ywlc family | SAMN05660350_00421 | Not Available | Positive | 398330 - 398974 | 22194.7 |
| hypothetical protein | SAMN05660350_00422 | Not Available | Positive | 399160 - 399687 | 19238.5 |
| transposase (or an inactivated derivative) | SAMN05660350_00423 | Not Available | Positive | 399909 - 401168 | 45848.8 |
| chat domain-containing protein | SAMN05660350_00424 | Not Available | Positive | 401354 - 402745 | 50294.2 |
| restriction endonuclease | SAMN05660350_00425 | Not Available | Positive | 402769 - 404223 | 53760.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

