Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05660350_04387 | Not Available | Negative | 4513811 - 4515502 | 57893.3 |
| lysophospholipase, alpha-beta hydrolase superfamily | SAMN05660350_04388 | Not Available | Negative | 4515754 - 4516680 | 31677.7 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_04389 | Not Available | Positive | 4516882 - 4517694 | 29991.2 |
| aaa atpase domain-containing protein | SAMN05660350_04390 | Not Available | Negative | 4517772 - 4518968 | 42441.5 |
| predicted thiol-disulfide oxidoreductase yuxk, dcc family | SAMN05660350_04391 | Not Available | Negative | 4519118 - 4519507 | 13373.2 |
| putative membrane protein | SAMN05660350_04392 | Not Available | Positive | 4519642 - 4520019 | 13123.7 |
| glutamate dehydrogenase | SAMN05660350_04393 | Not Available | Positive | 4520074 - 4525002 | 176706.0 |
| tigr03083 family protein | SAMN05660350_04394 | Not Available | Positive | 4525124 - 4525783 | 23464.1 |
| amidase | SAMN05660350_04395 | Not Available | Negative | 4525874 - 4527328 | 50705.0 |
| pas domain s-box-containing protein | SAMN05660350_04396 | Not Available | Negative | 4527551 - 4530154 | 93598.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

