Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal 5-phosphate dependent beta-lyase | SAMN05660350_04347 | Not Available | Negative | 4477751 - 4478890 | 38995.7 |
| anti-sigma-k factor rska | SAMN05660350_04348 | Not Available | Negative | 4478906 - 4479700 | 26293.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660350_04349 | Not Available | Negative | 4479681 - 4480328 | 23433.8 |
| sortase family protein | SAMN05660350_04350 | Not Available | Negative | 4480325 - 4480972 | 22158.5 |
| protein of unknown function | SAMN05660350_04351 | Not Available | Negative | 4480994 - 4481812 | 26619.2 |
| l-histidine nalpha-methyltransferase | SAMN05660350_04352 | Not Available | Negative | 4482048 - 4483016 | 34747.9 |
| glutamine amidotransferase | SAMN05660350_04353 | Not Available | Negative | 4483025 - 4483714 | 24370.7 |
| iron(ii)-dependent oxidoreductase | SAMN05660350_04354 | Not Available | Negative | 4483715 - 4485022 | 47929.3 |
| glutamate--cysteine ligase | SAMN05660350_04355 | Not Available | Negative | 4485019 - 4486272 | 42434.7 |
| hypothetical protein | SAMN05660350_04356 | Not Available | Positive | 4486433 - 4486906 | 16668.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

