Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion system protein vird4 | SAMN05660350_00406 | Not Available | Positive | 382132 - 384042 | 66117.6 |
| hypothetical protein | SAMN05660350_00407 | Not Available | Positive | 384039 - 384611 | 21150.0 |
| hypothetical protein | SAMN05660350_00408 | Not Available | Positive | 384608 - 385201 | 21311.1 |
| hypothetical protein | SAMN05660350_00409 | Not Available | Positive | 385198 - 385494 | 10119.0 |
| hypothetical protein | SAMN05660350_00410 | Not Available | Positive | 385498 - 386820 | 45924.4 |
| transposase (or an inactivated derivative) | SAMN05660350_00411 | Not Available | Negative | 387313 - 388536 | 44573.5 |
| hypothetical protein | SAMN05660350_00412 | Not Available | Positive | 389501 - 390586 | 39824.0 |
| xylulose-5-phosphate/fructose-6-phosphate phosphoketolase | SAMN05660350_00413 | Not Available | Positive | 390583 - 392616 | 71850.0 |
| l-alanine-dl-glutamate epimerase | SAMN05660350_00414 | Not Available | Positive | 392613 - 393674 | 37464.2 |
| hypothetical protein | SAMN05660350_00415 | Not Available | Positive | 393674 - 394135 | 16328.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

