Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | SAMN05660350_04276 | Not Available | Negative | 4416841 - 4417983 | 42364.5 |
| solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 | SAMN05660350_04277 | Not Available | Negative | 4418334 - 4419950 | 56572.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05660350_04278 | Not Available | Negative | 4419997 - 4420533 | 18922.7 |
| hypothetical protein | SAMN05660350_04279 | Not Available | Negative | 4420530 - 4421399 | 30544.2 |
| protein-tyrosine phosphatase | SAMN05660350_04280 | Not Available | Negative | 4421410 - 4421835 | 15218.0 |
| ribosomal protein s18 acetylase rimi | SAMN05660350_04281 | Not Available | Negative | 4421832 - 4422815 | 35115.4 |
| gyd domain-containing protein | SAMN05660350_04282 | Not Available | Positive | 4422927 - 4423247 | 11126.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05660350_04283 | Not Available | Negative | 4423270 - 4423983 | 25925.2 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05660350_04284 | Not Available | Negative | 4424156 - 4425346 | 43236.5 |
| hypothetical protein | SAMN05660350_04285 | Not Available | Negative | 4425700 - 4426599 | 33510.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

