Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660350_04266 | Not Available | Negative | 4404124 - 4404288 | 5724.86 |
| pas domain s-box-containing protein | SAMN05660350_04267 | Not Available | Positive | 4404504 - 4406615 | 75043.9 |
| membrane-bound lytic murein transglycosylase b | SAMN05660350_04268 | Not Available | Positive | 4406728 - 4408377 | 53850.7 |
| tartrate dehydrogenase/decarboxylase / d-malate dehydrogenase | SAMN05660350_04269 | Not Available | Negative | 4408439 - 4409521 | 38867.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05660350_04270 | Not Available | Negative | 4409610 - 4410578 | 34086.1 |
| threonyl-trna synthetase | SAMN05660350_04271 | Not Available | Positive | 4410919 - 4412214 | 47244.1 |
| putative methionine and alanine importer, small subunit | SAMN05660350_04272 | Not Available | Negative | 4412581 - 4412715 | 4792.07 |
| neurotransmitter:na+ symporter, nss family | SAMN05660350_04273 | Not Available | Negative | 4412712 - 4414346 | 57064.1 |
| metallo-beta-lactamase superfamily protein | SAMN05660350_04274 | Not Available | Negative | 4415069 - 4415995 | 33237.1 |
| Tmrna,resume consensus sequence (at 92): cacaagcgccgactccag | Not Available | Not Available | Positive | 4416280 - 4416652 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

