Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase (or an inactivated derivative) | SAMN05660350_04236 | Not Available | Positive | 4369085 - 4370344 | 46174.9 |
| hypothetical protein | SAMN05660350_04237 | Not Available | Negative | 4370577 - 4371401 | 29170.2 |
| hypothetical protein | SAMN05660350_04238 | Not Available | Negative | 4371640 - 4371954 | 11752.8 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN05660350_04239 | Not Available | Negative | 4372079 - 4373362 | 45231.6 |
| regulatory protein, luxr family | SAMN05660350_04240 | Not Available | Positive | 4373506 - 4374711 | 42486.6 |
| hypothetical protein | SAMN05660350_04241 | Not Available | Negative | 4374800 - 4374970 | 5979.21 |
| abc-2 type transport system permease protein | SAMN05660350_04242 | Not Available | Negative | 4375088 - 4375927 | 29362.8 |
| abc-2 type transport system atp-binding protein | SAMN05660350_04243 | Not Available | Negative | 4375924 - 4376904 | 35112.2 |
| protein of unknown function | SAMN05660350_04244 | Not Available | Negative | 4377020 - 4377427 | 15289.5 |
| mfs transporter, dha1 family, arabinose polymer transporter | SAMN05660350_04245 | Not Available | Negative | 4377400 - 4378860 | 47868.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

