Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | SAMN05660350_04185 | Not Available | Negative | 4317156 - 4318694 | 56346.1 |
| transcriptional regulator, alpa family | SAMN05660350_04187 | Not Available | Negative | 4318768 - 4319067 | 11213.5 |
| uncharacterized conserved protein, duf433 family | SAMN05660350_04188 | Not Available | Positive | 4319398 - 4319673 | 9327.32 |
| hypothetical protein | SAMN05660350_04189 | Not Available | Positive | 4319670 - 4320029 | 12363.1 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05660350_04190 | Not Available | Negative | 4320532 - 4321386 | 30260.5 |
| helix-turn-helix domain-containing protein | SAMN05660350_04191 | Not Available | Positive | 4321563 - 4322480 | 33539.5 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05660350_04192 | Not Available | Negative | 4323056 - 4323682 | 22157.4 |
| transcriptional regulator, gntr family | SAMN05660350_04193 | Not Available | Negative | 4323703 - 4324572 | 31290.2 |
| 2-keto-3-deoxygluconate permease | SAMN05660350_04194 | Not Available | Positive | 4324735 - 4325757 | 34310.6 |
| ribulose-bisphosphate carboxylase large chain | SAMN05660350_04195 | Not Available | Positive | 4325796 - 4327058 | 44303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

