Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyisoprenoid-binding protein ycei | SAMN05660350_04166 | Not Available | Positive | 4297553 - 4298113 | 20151.7 |
| hypothetical protein | SAMN05660350_04167 | Not Available | Positive | 4298214 - 4298546 | 10921.6 |
| hypothetical protein | SAMN05660350_04168 | Not Available | Positive | 4298562 - 4299164 | 20773.8 |
| gtp-binding protein | SAMN05660350_04169 | Not Available | Positive | 4299270 - 4301159 | 68816.4 |
| aldose 1-epimerase | SAMN05660350_04170 | Not Available | Positive | 4301681 - 4302913 | 43606.6 |
| hypothetical protein | SAMN05660350_04171 | Not Available | Positive | 4303112 - 4303612 | 17996.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05660350_04172 | Not Available | Positive | 4303724 - 4304725 | 35227.7 |
| hypothetical protein | SAMN05660350_04173 | Not Available | Negative | 4304805 - 4305806 | 34505.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05660350_04174 | Not Available | Negative | 4306055 - 4306603 | 19489.1 |
| predicted anti-sigma-ylac factor ylad, contains zn-finger domain | SAMN05660350_04175 | Not Available | Positive | 4306690 - 4307337 | 21694.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

