Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase-like superfamily protein | SAMN05660350_04115 | Not Available | Negative | 4241383 - 4242186 | 28154.7 |
| hypothetical protein | SAMN05660350_04116 | Not Available | Negative | 4242209 - 4242586 | 12903.1 |
| choline/carnitine/betaine transport | SAMN05660350_04117 | Not Available | Positive | 4242841 - 4244682 | 63659.5 |
| hypothetical protein | SAMN05660350_04118 | Not Available | Positive | 4244754 - 4245158 | 14490.9 |
| threonine/homoserine efflux transporter rhta | SAMN05660350_04119 | Not Available | Positive | 4245208 - 4246179 | 33604.0 |
| iron complex transport system substrate-binding protein | SAMN05660350_04120 | Not Available | Negative | 4246225 - 4247220 | 34884.2 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN05660350_04121 | Not Available | Positive | 4247326 - 4248246 | 32231.5 |
| iron complex transport system atp-binding protein | SAMN05660350_04122 | Not Available | Negative | 4248295 - 4249137 | 30503.8 |
| membrane carboxypeptidase (penicillin-binding protein) | SAMN05660350_04123 | Not Available | Positive | 4249408 - 4251840 | 84742.1 |
| uncharacterized membrane protein | SAMN05660350_04124 | Not Available | Positive | 4251916 - 4253361 | 52269.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

