Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05660350_04104 | Not Available | Positive | 4231728 - 4232216 | 17191.6 |
| cell wall-associated hydrolase, nlpc family | SAMN05660350_04105 | Not Available | Positive | 4232414 - 4233436 | 34299.3 |
| amino acid transporter | SAMN05660350_04106 | Not Available | Positive | 4233546 - 4235021 | 50930.4 |
| uncharacterized conserved protein ydei, yjbr/cyay-like superfamily, duf1801 family | SAMN05660350_04107 | Not Available | Negative | 4234987 - 4235565 | 20622.6 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05660350_04108 | Not Available | Positive | 4235624 - 4236214 | 20011.9 |
| homoserine o-acetyltransferase | SAMN05660350_04109 | Not Available | Negative | 4236231 - 4237346 | 38635.8 |
| o-acetylhomoserine sulfhydrylase | SAMN05660350_04110 | Not Available | Negative | 4237348 - 4238640 | 45963.2 |
| alcohol dehydrogenase | SAMN05660350_04112 | Not Available | Positive | 4238900 - 4239916 | 34668.8 |
| hypothetical protein | SAMN05660350_04113 | Not Available | Negative | 4239921 - 4240394 | 15611.0 |
| small conductance mechanosensitive channel | SAMN05660350_04114 | Not Available | Negative | 4240391 - 4241296 | 31998.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

