Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multisubunit sodium/proton antiporter, mrpg subunit (tc 2.a.63.1) | SAMN05660350_03983 | Not Available | Positive | 4112394 - 4112801 | 14547.9 |
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN05660350_03984 | Not Available | Negative | 4112789 - 4113529 | 25666.0 |
| 2-isopropylmalate synthase | SAMN05660350_03985 | Not Available | Negative | 4113560 - 4115305 | 64190.7 |
| helix-turn-helix domain-containing protein | SAMN05660350_03986 | Not Available | Negative | 4115481 - 4116116 | 22803.5 |
| phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase | SAMN05660350_03987 | Not Available | Negative | 4116319 - 4117902 | 59109.2 |
| aspartate kinase | SAMN05660350_03988 | Not Available | Positive | 4117986 - 4119254 | 44219.6 |
| formate dehydrogenase iron-sulfur subunit | SAMN05660350_03989 | Not Available | Negative | 4119290 - 4120263 | 34787.5 |
| formate dehydrogenase major subunit | SAMN05660350_03990 | Not Available | Negative | 4120385 - 4123102 | 100007.0 |
| formate dehydrogenase major subunit | SAMN05660350_03991 | Not Available | Negative | 4123115 - 4123870 | 27330.4 |
| transcriptional regulator, abiei antitoxin, type iv ta system | SAMN05660350_03992 | Not Available | Negative | 4123983 - 4124852 | 31702.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

