Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | SAMN05660350_03953 | Not Available | Positive | 4077416 - 4078660 | 42688.7 |
| ribose transport system permease protein | SAMN05660350_03954 | Not Available | Positive | 4078657 - 4079694 | 34733.3 |
| ribose transport system substrate-binding protein | SAMN05660350_03955 | Not Available | Positive | 4079691 - 4080908 | 42612.5 |
| ribose transport system atp-binding protein | SAMN05660350_03956 | Not Available | Positive | 4080913 - 4082427 | 53284.5 |
| ribose transport system permease protein | SAMN05660350_03957 | Not Available | Positive | 4082424 - 4083398 | 32344.7 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN05660350_03958 | Not Available | Positive | 4083395 - 4084300 | 32205.4 |
| aspartate aminotransferase | SAMN05660350_03959 | Not Available | Positive | 4084324 - 4085469 | 40752.6 |
| dna polymerase iii, tau subunit | SAMN05660350_03960 | Not Available | Positive | 4085743 - 4088004 | 78944.3 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05660350_03961 | Not Available | Negative | 4088090 - 4088572 | 18129.3 |
| transcriptional regulator, arsr family | SAMN05660350_03962 | Not Available | Negative | 4088569 - 4089009 | 15994.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

