Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna m(2)a-2503 methyltransferase | SAMN05660350_03910 | Not Available | Positive | 4038889 - 4040064 | 41726.9 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN05660350_03911 | Not Available | Positive | 4040061 - 4040777 | 24536.6 |
| transcriptional attenuator, lytr family | SAMN05660350_03912 | Not Available | Negative | 4040784 - 4041761 | 33407.8 |
| hypothetical protein | SAMN05660350_03913 | Not Available | Negative | 4041764 - 4042717 | 31910.9 |
| protein of unknown function | SAMN05660350_03914 | Not Available | Negative | 4043085 - 4043411 | 12515.0 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05660350_03915 | Not Available | Positive | 4043500 - 4044696 | 40966.9 |
| rip metalloprotease rsep | SAMN05660350_03916 | Not Available | Positive | 4044707 - 4046071 | 48603.1 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05660350_03917 | Not Available | Positive | 4046136 - 4047299 | 40337.8 |
| hypothetical protein | SAMN05660350_03918 | Not Available | Positive | 4047308 - 4048240 | 32087.6 |
| cell division protein ftsi/penicillin-binding protein 2 | SAMN05660350_03919 | Not Available | Positive | 4048404 - 4050302 | 64056.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

