Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN05660350_03890 | Not Available | Negative | 4019805 - 4020476 | 23485.5 |
| hypothetical protein | SAMN05660350_03891 | Not Available | Negative | 4020785 - 4021436 | 21441.2 |
| tetratricopeptide repeat-containing protein | SAMN05660350_03892 | Not Available | Negative | 4021437 - 4022005 | 20052.6 |
| tetratricopeptide repeat-containing protein | SAMN05660350_03893 | Not Available | Negative | 4022643 - 4025005 | 83981.7 |
| hypothetical protein | SAMN05660350_03894 | Not Available | Negative | 4025097 - 4025516 | 14743.0 |
| dna processing protein | SAMN05660350_03895 | Not Available | Positive | 4025734 - 4025853 | 4170.09 |
| tyrosine recombinase xerc subunit | SAMN05660350_03896 | Not Available | Positive | 4025965 - 4026870 | 32290.7 |
| rna polymerase, sigma 28 subunit, sigd/flia/whig | SAMN05660350_03897 | Not Available | Positive | 4026885 - 4027787 | 33015.3 |
| peptidase family m23 | SAMN05660350_03898 | Not Available | Negative | 4027888 - 4028397 | 17003.7 |
| ssu ribosomal protein s2p | SAMN05660350_03899 | Not Available | Positive | 4028701 - 4029675 | 34921.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

