Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminate synthase | SAMN05660350_03709 | Not Available | Positive | 3830946 - 3832016 | 38101.3 |
| udp-n-acetylglucosamine 2-epimerase (hydrolysing) | SAMN05660350_03710 | Not Available | Positive | 3832114 - 3833271 | 40999.8 |
| n-acylneuraminate cytidylyltransferase | SAMN05660350_03711 | Not Available | Negative | 3833268 - 3833990 | 24204.1 |
| dtdp-glucose 4,6-dehydratase | SAMN05660350_03712 | Not Available | Positive | 3834044 - 3835051 | 36601.8 |
| dtdp-4-dehydrorhamnose reductase | SAMN05660350_03713 | Not Available | Positive | 3835048 - 3835944 | 30864.4 |
| lgfp repeat-containing protein | SAMN05660350_03714 | Not Available | Positive | 3836115 - 3839063 | 101568.0 |
| hypothetical protein | SAMN05660350_03715 | Not Available | Positive | 3839279 - 3839833 | 18194.6 |
| lgfp repeat-containing protein | SAMN05660350_03716 | Not Available | Positive | 3839830 - 3842721 | 100345.0 |
| hypothetical protein | SAMN05660350_03717 | Not Available | Negative | 3842789 - 3843370 | 21532.5 |
| hypothetical protein | SAMN05660350_03718 | Not Available | Negative | 3843367 - 3844053 | 24774.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

