Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease i subunit d | SAMN05660350_03689 | Not Available | Positive | 3809503 - 3810654 | 41120.9 |
| exonuclease sbcc | SAMN05660350_03690 | Not Available | Positive | 3810651 - 3813611 | 104539.0 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05660350_03691 | Not Available | Positive | 3813794 - 3815221 | 50671.7 |
| putative flippase gtra (transmembrane translocase of bactoprenol-linked glucose) | SAMN05660350_03692 | Not Available | Negative | 3815253 - 3815708 | 16411.2 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05660350_03693 | Not Available | Positive | 3815960 - 3817312 | 48717.8 |
| lysophospholipase l1 | SAMN05660350_03694 | Not Available | Positive | 3817411 - 3818088 | 21974.6 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | SAMN05660350_03695 | Not Available | Positive | 3818142 - 3819347 | 42454.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN05660350_03696 | Not Available | Positive | 3819389 - 3819889 | 17020.7 |
| acyl-coa dehydrogenase | SAMN05660350_03697 | Not Available | Positive | 3819917 - 3821074 | 41121.9 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | SAMN05660350_03698 | Not Available | Negative | 3821208 - 3821726 | 17517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

