Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase fad binding subunit | SAMN05660350_03649 | Not Available | Negative | 3768767 - 3769954 | 39858.8 |
| glycolate oxidase | SAMN05660350_03650 | Not Available | Negative | 3769954 - 3771486 | 53512.9 |
| malate synthase | SAMN05660350_03651 | Not Available | Negative | 3771494 - 3773104 | 59927.7 |
| transcriptional regulator, iclr family | SAMN05660350_03652 | Not Available | Positive | 3773296 - 3774072 | 26883.7 |
| dna-binding transcriptional regulator, marr family | SAMN05660350_03653 | Not Available | Positive | 3774170 - 3774640 | 16611.8 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05660350_03654 | Not Available | Positive | 3774694 - 3776343 | 56422.7 |
| diacylglycerol kinase family enzyme | SAMN05660350_03655 | Not Available | Positive | 3776400 - 3777326 | 30931.7 |
| osmotically inducible protein osmc | SAMN05660350_03656 | Not Available | Negative | 3777420 - 3777860 | 14922.4 |
| transcriptional regulator, marr family | SAMN05660350_03657 | Not Available | Negative | 3777949 - 3778392 | 16276.8 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05660350_03658 | Not Available | Positive | 3778594 - 3781179 | 93908.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

