Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus obscurus |
| Strain | strain DSM 43162 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | 29 |
| Temperature range | Mesophilic |
| Habitat | rock varnish in deserts |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Filaments |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
672646 bp
Thymine Count
669679 bp
Guanine Count
1946950 bp
Cytosine Count
1943672 bp
Genome Length
5238583 bp
Protein-coding Genes
5003 genes
Non-Coding Genes
60 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | SAMN05660350_03589 | Not Available | Positive | 3697096 - 3697857 | 26643.7 |
| stage ii sporulation protein e (spoiie) | SAMN05660350_03590 | Not Available | Positive | 3697854 - 3699332 | 52513.6 |
| uroporphyrinogen-iii synthase | SAMN05660350_03591 | Not Available | Positive | 3699427 - 3700557 | 38999.5 |
| mfs transporter, nnp family, nitrate/nitrite transporter | SAMN05660350_03592 | Not Available | Negative | 3700636 - 3702021 | 48768.7 |
| hypothetical protein | SAMN05660350_03593 | Not Available | Positive | 3702171 - 3702968 | 27800.3 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05660350_03594 | Not Available | Positive | 3703079 - 3703579 | 18290.6 |
| hypothetical protein | SAMN05660350_03595 | Not Available | Positive | 3703576 - 3704385 | 27262.4 |
| hypothetical protein | SAMN05660350_03596 | Not Available | Positive | 3704382 - 3704789 | 13152.6 |
| methyltransferase domain-containing protein | SAMN05660350_03597 | Not Available | Negative | 3704792 - 3705433 | 22448.2 |
| transcriptional regulator, xre family with cupin sensor | SAMN05660350_03598 | Not Available | Positive | 3705492 - 3706094 | 22050.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

